Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS23975 | Not Available | Positive | 4975880 - 4976320 | 16245.3 |
| relaxase | D4M06_RS23980 | Not Available | Negative | 4976363 - 4980556 | 160350.0 |
| mobc family plasmid mobilization relaxosome protein | D4M06_RS23985 | Not Available | Negative | 4980553 - 4980894 | 13148.0 |
| hypothetical protein | D4M06_RS23990 | Not Available | Positive | 4981224 - 4981703 | 18346.9 |
| transcriptional regulator | D4M06_RS23995 | Not Available | Positive | 4981709 - 4982410 | 26397.4 |
| hypothetical protein | D4M06_RS24000 | Not Available | Positive | 4982457 - 4983056 | 22527.1 |
| hypothetical protein | D4M06_RS24005 | Not Available | Positive | 4983076 - 4983528 | 16813.7 |
| hypothetical protein | D4M06_RS24010 | Not Available | Positive | 4983530 - 4983793 | 9979.92 |
| hypothetical protein | D4M06_RS24015 | Not Available | Positive | 4983804 - 4984124 | 11917.2 |
| copg family transcriptional regulator | D4M06_RS24020 | Not Available | Negative | 4984255 - 4984692 | 16115.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




