Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | Positive | 4960181 - 4960256 | Not Available |
| toxic metabolite efflux mate transporter yeeo | D4M06_RS23880 | Not Available | Negative | 4960357 - 4962000 | 60085.9 |
| Trna-asn | Not Available | Not Available | Positive | 4962005 - 4962080 | Not Available |
| hth-type transcriptional regulator cbl | D4M06_RS23890 | Not Available | Negative | 4962118 - 4963068 | 35921.2 |
| nitrogen assimilation transcriptional regulator | D4M06_RS23895 | Not Available | Negative | 4963170 - 4964087 | 32809.0 |
| Trna-asn | Not Available | Not Available | Positive | 4964413 - 4964488 | Not Available |
| l,d-transpeptidase | D4M06_RS23905 | Not Available | Negative | 4964544 - 4965479 | 34508.4 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | D4M06_RS23910 | Not Available | Negative | 4965541 - 4966620 | 36899.3 |
| adenosylcobinamide-gdp ribazoletransferase | D4M06_RS23915 | Not Available | Negative | 4966632 - 4967375 | 26397.4 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | D4M06_RS23920 | Not Available | Negative | 4967372 - 4967917 | 20165.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




