Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | D4M06_RS23820 | Not Available | Negative | 4942514 - 4943068 | 20246.3 |
| duf4224 domain-containing protein | D4M06_RS23825 | Not Available | Positive | 4943443 - 4943646 | 7631.19 |
| tyrosine-type recombinase/integrase | D4M06_RS23830 | Not Available | Positive | 4943646 - 4944668 | 39146.9 |
| Trna-ser | Not Available | Not Available | Positive | 4944721 - 4944810 | Not Available |
| dgsa anti-repressor mtfa | D4M06_RS23840 | Not Available | Positive | 4944904 - 4945701 | 30280.7 |
| Trna-asn | Not Available | Not Available | Positive | 4945802 - 4945877 | Not Available |
| glycosyltransferase family 9 protein | D4M06_RS23855 | Not Available | Negative | 4954434 - 4955486 | 39553.5 |
| shikimate transporter | D4M06_RS23860 | Not Available | Positive | 4955800 - 4957116 | 47879.3 |
| amp nucleosidase | D4M06_RS23865 | Not Available | Positive | 4957218 - 4958672 | 53997.9 |
| yebc/pmpr family dna-binding transcriptional regulator | D4M06_RS23870 | Not Available | Positive | 4959015 - 4959731 | 25840.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




