Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium transporter trka | D4M06_RS23770 | Not Available | Negative | 4934411 - 4935787 | 50370.8 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | D4M06_RS23775 | Not Available | Negative | 4935809 - 4937098 | 48354.2 |
| methionyl-trna formyltransferase | D4M06_RS23780 | Not Available | Negative | 4937144 - 4938091 | 34142.4 |
| peptide deformylase | D4M06_RS23785 | Not Available | Negative | 4938106 - 4938615 | 19329.6 |
| dna-protecting protein dpra | D4M06_RS23790 | Not Available | Positive | 4938745 - 4939869 | 41008.3 |
| duf494 domain-containing protein | D4M06_RS23795 | Not Available | Positive | 4939841 - 4940335 | 19240.0 |
| hypothetical protein | D4M06_RS23800 | Not Available | Positive | 4940342 - 4940884 | 19872.0 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | D4M06_RS23805 | Not Available | Positive | 4940889 - 4941461 | 20669.8 |
| shikimate dehydrogenase | D4M06_RS23810 | Not Available | Positive | 4941466 - 4942284 | 29296.2 |
| duf1488 domain-containing protein | D4M06_RS23815 | Not Available | Positive | 4942281 - 4942538 | 9977.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




