Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l36 | D4M06_RS23720 | Not Available | Positive | 4929571 - 4929687 | 4364.59 |
| 30s ribosomal protein s13 | D4M06_RS23725 | Not Available | Positive | 4929834 - 4930190 | 13100.2 |
| 30s ribosomal protein s11 | D4M06_RS23730 | Not Available | Positive | 4930207 - 4930596 | 13845.7 |
| 30s ribosomal protein s4 | D4M06_RS23735 | Not Available | Positive | 4930630 - 4931250 | 23470.5 |
| dna-directed rna polymerase subunit alpha | D4M06_RS23740 | Not Available | Positive | 4931276 - 4932265 | 36513.9 |
| 50s ribosomal protein l17 | D4M06_RS23745 | Not Available | Positive | 4932306 - 4932689 | 14365.4 |
| duf1992 domain-containing protein | D4M06_RS23750 | Not Available | Positive | 4932796 - 4933164 | 13944.6 |
| zn(2+)-responsive transcriptional regulator | D4M06_RS23755 | Not Available | Positive | 4933175 - 4933600 | 16180.4 |
| alternative ribosome-rescue factor a | D4M06_RS23760 | Not Available | Positive | 4933656 - 4933874 | 8171.86 |
| large-conductance mechanosensitive channel protein mscl | D4M06_RS23765 | Not Available | Negative | 4933871 - 4934281 | 14957.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




