Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutaramate amidase | D4M06_RS23570 | Not Available | Positive | 4912796 - 4913566 | 28952.6 |
| isas1-like element isec26 family transposase | D4M06_RS23575 | Not Available | Negative | 4913684 - 4914856 | 44240.4 |
| hypothetical protein | D4M06_RS23580 | Not Available | Positive | 4914937 - 4915122 | 7383.19 |
| dctp deaminase | D4M06_RS23585 | Not Available | Negative | 4915037 - 4915300 | 10490.3 |
| rhs repeat protein | D4M06_RS23590 | Not Available | Negative | 4915502 - 4917251 | 66055.9 |
| bacterioferritin-associated ferredoxin | D4M06_RS23595 | Not Available | Positive | 4917449 - 4917643 | 7475.27 |
| bacterioferritin | D4M06_RS23600 | Not Available | Positive | 4917716 - 4918192 | 18339.0 |
| prepilin peptidase | D4M06_RS23605 | Not Available | Negative | 4918189 - 4918656 | 17100.2 |
| 30s ribosomal protein s10 | D4M06_RS23610 | Not Available | Positive | 4919035 - 4919346 | 11736.3 |
| 50s ribosomal protein l3 | D4M06_RS23615 | Not Available | Positive | 4919379 - 4920008 | 22244.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




