Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lateral flagellar export/assembly protein lafu | D4M06_RS23515 | Not Available | Negative | 4902340 - 4903125 | 28939.9 |
| flagellar type iii secretion system protein flha | D4M06_RS23520 | Not Available | Positive | 4903070 - 4904809 | 63162.0 |
| c40 family peptidase | D4M06_RS23530 | Not Available | Negative | 4905627 - 4906400 | 29731.5 |
| type ii toxin-antitoxin system antitoxin dinj | D4M06_RS23535 | Not Available | Positive | 4906586 - 4906846 | 9378.27 |
| type ii toxin-antitoxin system mrna interferase toxin yafq | D4M06_RS23540 | Not Available | Positive | 4906865 - 4907125 | 10027.3 |
| murein l,d-transpeptidase | D4M06_RS23545 | Not Available | Positive | 4907281 - 4908021 | 28022.8 |
| class ii glutamine amidotransferase | D4M06_RS23550 | Not Available | Negative | 4907992 - 4908759 | 28662.2 |
| d-sedoheptulose 7-phosphate isomerase | D4M06_RS23555 | Not Available | Negative | 4908864 - 4909442 | 20816.0 |
| acyl-coa dehydrogenase | D4M06_RS23560 | Not Available | Positive | 4909682 - 4912126 | 89186.7 |
| c-lysozyme inhibitor | D4M06_RS23565 | Not Available | Negative | 4912169 - 4912642 | 16873.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




