Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma factor-binding protein crl | D4M06_RS23465 | Not Available | Negative | 4894936 - 4895337 | 15684.8 |
| esterase frsa | D4M06_RS23470 | Not Available | Negative | 4895395 - 4896639 | 47060.5 |
| xanthine phosphoribosyltransferase | D4M06_RS23475 | Not Available | Negative | 4896731 - 4897189 | 16971.6 |
| cytosol nonspecific dipeptidase | D4M06_RS23480 | Not Available | Positive | 4897450 - 4898907 | 52920.4 |
| peptide chain release factor h | D4M06_RS23485 | Not Available | Negative | 4898964 - 4899500 | 20232.9 |
| hypothetical protein | D4M06_RS23490 | Not Available | Negative | 4899433 - 4899699 | 9850.89 |
| gnat family n-acetyltransferase | D4M06_RS23495 | Not Available | Negative | 4900006 - 4900458 | 17523.1 |
| type ii toxin-antitoxin system mrna interferase toxin yafo | D4M06_RS23500 | Not Available | Negative | 4900468 - 4900866 | 15474.7 |
| type i toxin-antitoxin system antitoxin yafn | D4M06_RS23505 | Not Available | Negative | 4900869 - 4901162 | 11234.4 |
| dna polymerase iv | D4M06_RS23510 | Not Available | Negative | 4901214 - 4902269 | 39463.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




