Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna damage-inducible protein dini | D4M06_RS23405 | Not Available | Positive | 4885621 - 4885869 | 9391.2 |
| t3ss effector guanine nucleotide exchange factor espm2 | D4M06_RS23415 | Not Available | Negative | 4886371 - 4886961 | 22482.7 |
| t3ss effector nleg family protein | D4M06_RS23420 | Not Available | Positive | 4887144 - 4887794 | 24511.4 |
| t3ss effector espw | D4M06_RS23425 | Not Available | Positive | 4887873 - 4888931 | 40075.9 |
| duf1076 domain-containing protein | D4M06_RS23430 | Not Available | Negative | 4889061 - 4889483 | 15714.6 |
| antitermination protein | D4M06_RS23435 | Not Available | Positive | 4889871 - 4890116 | 9576.45 |
| Trna-thr | Not Available | Not Available | Positive | 4890996 - 4891071 | Not Available |
| glutamate-5-semialdehyde dehydrogenase | D4M06_RS23450 | Not Available | Negative | 4891186 - 4892439 | 44754.9 |
| glutamate 5-kinase | D4M06_RS23455 | Not Available | Negative | 4892451 - 4893554 | 39058.9 |
| phosphoporin phoe | D4M06_RS23460 | Not Available | Positive | 4893842 - 4894897 | 38968.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




