Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-7-phosphoheptulonate synthase arof | D4M06_RS23305 | Not Available | Negative | 4869587 - 4870657 | 38762.2 |
| duf2799 domain-containing protein | D4M06_RS23310 | Not Available | Positive | 4870867 - 4871232 | 13174.3 |
| duf4154 domain-containing protein | D4M06_RS23315 | Not Available | Positive | 4871382 - 4871900 | 18979.2 |
| diguanylate cyclase dgcn | D4M06_RS23320 | Not Available | Positive | 4871890 - 4873116 | 45828.1 |
| ompa family protein | D4M06_RS23325 | Not Available | Positive | 4873132 - 4873614 | 17255.6 |
| 50s ribosomal protein l19 | D4M06_RS23330 | Not Available | Negative | 4873691 - 4874038 | 13134.0 |
| trna (guanosine(37)-n1)-methyltransferase trmd | D4M06_RS23335 | Not Available | Negative | 4874080 - 4874847 | 28424.0 |
| ribosome maturation factor rimm | D4M06_RS23340 | Not Available | Negative | 4874878 - 4875426 | 20606.6 |
| 30s ribosomal protein s16 | D4M06_RS23345 | Not Available | Negative | 4875445 - 4875693 | 9191.08 |
| signal recognition particle protein | D4M06_RS23350 | Not Available | Negative | 4875830 - 4877191 | 49790.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




