Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose-like permease iic component | D4M06_RS23205 | Not Available | Negative | 4849422 - 4850669 | 43955.0 |
| fructose-like phosphotransferase enzyme iib component 1 | D4M06_RS23210 | Not Available | Negative | 4850691 - 4851017 | 11736.0 |
| glucokinase | D4M06_RS23215 | Not Available | Negative | 4851236 - 4852201 | 34725.1 |
| ion channel protein | D4M06_RS23220 | Not Available | Positive | 4852405 - 4853661 | 43576.4 |
| duf2502 domain-containing protein | D4M06_RS23225 | Not Available | Positive | 4853776 - 4854102 | 13263.4 |
| mn(2+) uptake nramp transporter mnth | D4M06_RS23230 | Not Available | Negative | 4854242 - 4855480 | 44196.5 |
| nucleoside permease nupc | D4M06_RS23235 | Not Available | Positive | 4855816 - 4857018 | 43460.5 |
| sensor domain-containing phosphodiesterase | D4M06_RS23240 | Not Available | Negative | 4857068 - 4859257 | 83575.1 |
| Trna-ala | Not Available | Not Available | Positive | 4859465 - 4859540 | Not Available |
| putative dna-binding transcriptional regulator | D4M06_RS23250 | Not Available | Positive | 4859776 - 4860120 | 12720.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




