Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfdy family protein | D4M06_RS23155 | Not Available | Negative | 4837824 - 4838066 | 8957.51 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | D4M06_RS23160 | Not Available | Positive | 4838419 - 4839339 | 35495.5 |
| membrane protein ypdk | D4M06_RS23165 | Not Available | Positive | 4839695 - 4839766 | 2704.57 |
| alanine transaminase | D4M06_RS23170 | Not Available | Negative | 4839831 - 4841069 | 46175.8 |
| sensor histidine kinase | D4M06_RS23175 | Not Available | Positive | 4841446 - 4843143 | 62661.3 |
| response regulator transcription factor | D4M06_RS23180 | Not Available | Positive | 4843158 - 4843892 | 28722.6 |
| helix-turn-helix transcriptional regulator | D4M06_RS23185 | Not Available | Positive | 4843905 - 4844762 | 32384.4 |
| phosphoenolpyruvate--protein phosphotransferase | D4M06_RS23190 | Not Available | Negative | 4844765 - 4847260 | 92218.4 |
| aminopeptidase | D4M06_RS23195 | Not Available | Negative | 4847285 - 4848322 | 37397.1 |
| aminopeptidase | D4M06_RS23200 | Not Available | Negative | 4848322 - 4849407 | 39771.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




