Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l11 | D4M06_RS23000 | Not Available | Positive | 4801717 - 4802145 | 14876.2 |
| 50s ribosomal protein l1 | D4M06_RS23005 | Not Available | Positive | 4802149 - 4802853 | 24731.1 |
| 50s ribosomal protein l10 | D4M06_RS23010 | Not Available | Positive | 4803145 - 4803642 | 17712.6 |
| 50s ribosomal protein l7/l12 | D4M06_RS23015 | Not Available | Positive | 4803709 - 4804074 | 12295.8 |
| dna-directed rna polymerase subunit beta | D4M06_RS23020 | Not Available | Positive | 4804394 - 4808422 | 150641.0 |
| dna-directed rna polymerase subunit beta' | D4M06_RS23025 | Not Available | Positive | 4808499 - 4812722 | 155169.0 |
| stationary phase growth adaptation protein | D4M06_RS23030 | Not Available | Positive | 4812935 - 4813378 | 17598.9 |
| 2-iminoacetate synthase thih | D4M06_RS23035 | Not Available | Negative | 4813813 - 4814946 | 43325.6 |
| thiazole synthase | D4M06_RS23040 | Not Available | Negative | 4814943 - 4815713 | 26866.6 |
| sulfur carrier protein this | D4M06_RS23045 | Not Available | Negative | 4815715 - 4815915 | 7351.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




