Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease stce | D4M06_RS22845 | Not Available | Negative | 4766348 - 4769044 | 99553.9 |
| ybfa family protein | D4M06_RS22850 | Not Available | Negative | 4769678 - 4769884 | 8275.0 |
| k(+)-transporting atpase subunit f | D4M06_RS22855 | Not Available | Positive | 4770197 - 4770286 | 3064.96 |
| potassium-transporting atpase subunit kdpa | D4M06_RS22860 | Not Available | Positive | 4770286 - 4771959 | 59099.6 |
| potassium-transporting atpase subunit kdpb | D4M06_RS22865 | Not Available | Positive | 4771982 - 4774030 | 72254.6 |
| k(+)-transporting atpase subunit c | D4M06_RS22870 | Not Available | Positive | 4774039 - 4774611 | 20412.5 |
| two-component system sensor histidine kinase kdbd | D4M06_RS22875 | Not Available | Positive | 4774604 - 4777288 | 98665.2 |
| two-component system response regulator kdpe | D4M06_RS22880 | Not Available | Positive | 4777285 - 4777962 | 25280.5 |
| duf2618 domain-containing protein | D4M06_RS22885 | Not Available | Positive | 4778237 - 4778341 | 4288.17 |
| ornithine decarboxylase spef | D4M06_RS22890 | Not Available | Positive | 4778652 - 4780850 | 82439.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




