Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body m-ring protein flif | D4M06_RS22485 | Not Available | Negative | 4703914 - 4705572 | 60712.8 |
| flagellar hook-basal body complex protein flie | D4M06_RS22490 | Not Available | Positive | 4705787 - 4706101 | 11127.5 |
| mfs transporter | D4M06_RS22645 | Not Available | Negative | 4723786 - 4725033 | 46859.2 |
| aminoimidazole riboside kinase | D4M06_RS22650 | Not Available | Negative | 4725105 - 4726019 | 33109.7 |
| glycoside hydrolase family 32 protein | D4M06_RS22655 | Not Available | Positive | 4726235 - 4727668 | 54450.9 |
| laci family dna-binding transcriptional regulator | D4M06_RS22660 | Not Available | Negative | 4727676 - 4728734 | 38671.3 |
| d-serine ammonia-lyase | D4M06_RS22670 | Not Available | Positive | 4729150 - 4730478 | 47903.3 |
| multidrug efflux mfs transporter permease subunit emry | D4M06_RS22675 | Not Available | Negative | 4730586 - 4732124 | 56120.6 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emrk | D4M06_RS22680 | Not Available | Negative | 4732124 - 4733287 | 42601.9 |
| acid-sensing system dna-binding response regulator evga | D4M06_RS22685 | Not Available | Positive | 4733703 - 4734317 | 22691.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




