Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| drug/metabolite exporter yeda | D4M06_RS22385 | Not Available | Negative | 4688342 - 4689262 | 32196.0 |
| duf808 domain-containing protein | D4M06_RS22390 | Not Available | Positive | 4689435 - 4690352 | 32162.8 |
| duf2158 domain-containing protein | D4M06_RS22395 | Not Available | Positive | 4690431 - 4690613 | 6678.85 |
| cellulose biosynthesis regulator yedq | D4M06_RS22400 | Not Available | Positive | 4690784 - 4692478 | 64290.5 |
| mannosyl-3-phosphoglycerate phosphatase-related protein | D4M06_RS22405 | Not Available | Negative | 4692475 - 4693290 | 30472.1 |
| peroxide/acid resistance protein yodd | D4M06_RS22410 | Not Available | Negative | 4693588 - 4693815 | 8579.66 |
| protein dsrb | D4M06_RS22415 | Not Available | Positive | 4693924 - 4694166 | 9071.8 |
| transcriptional regulator rcsa | D4M06_RS22420 | Not Available | Negative | 4694210 - 4694833 | 23517.8 |
| flagellar type iii secretion system protein flir | D4M06_RS22425 | Not Available | Negative | 4695123 - 4695908 | 28517.3 |
| flagellar biosynthesis protein fliq | D4M06_RS22430 | Not Available | Negative | 4695916 - 4696185 | 9632.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




