Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-binding protein zint | D4M06_RS22325 | Not Available | Negative | 4676784 - 4677434 | 24693.1 |
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | D4M06_RS22330 | Not Available | Negative | 4677691 - 4678326 | 24057.6 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | D4M06_RS22335 | Not Available | Negative | 4678327 - 4679331 | 37358.9 |
| hydroxyisourate hydrolase | D4M06_RS22340 | Not Available | Negative | 4679439 - 4679852 | 15537.6 |
| response regulator transcription factor hprr | D4M06_RS22345 | Not Available | Positive | 4679985 - 4680656 | 25010.2 |
| heavy metal sensor histidine kinase | D4M06_RS22350 | Not Available | Positive | 4680656 - 4682014 | 50864.7 |
| protein deglycase hcha | D4M06_RS22355 | Not Available | Negative | 4682122 - 4682973 | 31183.1 |
| phosphohydrolase | D4M06_RS22370 | Not Available | Positive | 4685722 - 4686417 | 25836.7 |
| dna cytosine methyltransferase | D4M06_RS22375 | Not Available | Positive | 4686484 - 4687902 | 53467.8 |
| very short patch repair endonuclease | D4M06_RS22380 | Not Available | Positive | 4687883 - 4688353 | 18043.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




