Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | D4M06_RS22275 | Not Available | Negative | 4666745 - 4667467 | 27291.7 |
| hydroxyacylglutathione hydrolase | D4M06_RS22280 | Not Available | Positive | 4667501 - 4668256 | 28435.9 |
| murein transglycosylase d | D4M06_RS22285 | Not Available | Positive | 4668328 - 4669686 | 49393.3 |
| methyltransferase domain-containing protein | D4M06_RS22290 | Not Available | Negative | 4669734 - 4670504 | 28258.4 |
| endonuclease/exonuclease/phosphatase family protein | D4M06_RS22295 | Not Available | Negative | 4670582 - 4671382 | 29993.4 |
| lysr family transcriptional regulator | D4M06_RS22300 | Not Available | Positive | 4671623 - 4672537 | 33724.7 |
| 2,5-didehydrogluconate reductase dkgb | D4M06_RS22305 | Not Available | Negative | 4672534 - 4673337 | 29440.4 |
| tir-cytoskeleton coupling protein tccp | D4M06_RS22310 | Not Available | Negative | 4673498 - 4673796 | 10981.1 |
| type iii secretion system effector adp-ribosyltransferase espj | D4M06_RS22315 | Not Available | Negative | 4674121 - 4674774 | 24670.8 |
| cytochrome b | D4M06_RS22320 | Not Available | Negative | 4675911 - 4676441 | 20366.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




