Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS22225 | Not Available | Positive | 4660445 - 4661854 | 53186.4 |
| hcp family type vi secretion system effector | D4M06_RS22230 | Not Available | Positive | 4661820 - 4662299 | 17867.2 |
| hypothetical protein | D4M06_RS22235 | Not Available | Positive | 4662320 - 4662541 | 8678.99 |
| peptidoglycan-binding protein | D4M06_RS22240 | Not Available | Positive | 4662620 - 4663216 | 22562.1 |
| hypothetical protein | D4M06_RS22245 | Not Available | Positive | 4663219 - 4663668 | 17230.8 |
| hypothetical protein | D4M06_RS22250 | Not Available | Positive | 4663665 - 4664021 | 14056.9 |
| hypothetical protein | D4M06_RS22255 | Not Available | Negative | 4664147 - 4664947 | 30070.8 |
| Trna-asp | Not Available | Not Available | Positive | 4665276 - 4665352 | Not Available |
| dna polymerase iii subunit epsilon | D4M06_RS22265 | Not Available | Negative | 4665485 - 4666216 | 27100.5 |
| ribonuclease hi | D4M06_RS22270 | Not Available | Positive | 4666281 - 4666748 | 17597.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




