Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbj | D4M06_RS22070 | Not Available | Negative | 4629421 - 4630062 | 24328.6 |
| type iv secretion system protein | D4M06_RS22075 | Not Available | Negative | 4630068 - 4631063 | 35663.2 |
| hypothetical protein | D4M06_RS22080 | Not Available | Negative | 4631067 - 4631324 | 9620.51 |
| hypothetical protein | D4M06_RS22085 | Not Available | Negative | 4631321 - 4631623 | 11338.2 |
| hypothetical protein | D4M06_RS22090 | Not Available | Negative | 4631894 - 4632145 | 9655.99 |
| nfed family protein | D4M06_RS22095 | Not Available | Negative | 4632524 - 4632865 | 12815.5 |
| spfh/band 7/phb domain protein | D4M06_RS22100 | Not Available | Negative | 4633030 - 4633983 | 34943.4 |
| duf1187 family protein | D4M06_RS22105 | Not Available | Negative | 4634029 - 4634223 | 7329.78 |
| caif/grla family transcriptional regulator | D4M06_RS22110 | Not Available | Negative | 4634216 - 4634722 | 19517.6 |
| replication initiation protein | D4M06_RS22115 | Not Available | Positive | 4635806 - 4636834 | 39952.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




