Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trad | D4M06_RS22020 | Not Available | Negative | 4623690 - 4624010 | 11898.2 |
| conjugal transfer protein | D4M06_RS22025 | Not Available | Negative | 4624081 - 4624269 | 6883.57 |
| lytic transglycosylase domain-containing protein | D4M06_RS22030 | Not Available | Negative | 4624371 - 4624955 | 21492.1 |
| hypothetical protein | D4M06_RS22035 | Not Available | Negative | 4624976 - 4625374 | 15303.5 |
| type iv pilus biogenesis protein pilm | D4M06_RS22040 | Not Available | Negative | 4625493 - 4625930 | 16451.9 |
| pilus assembly protein | D4M06_RS22045 | Not Available | Negative | 4625936 - 4627171 | 45656.1 |
| conjugal transfer protein | D4M06_RS22050 | Not Available | Negative | 4627174 - 4627473 | 10487.8 |
| hypothetical protein | D4M06_RS22055 | Not Available | Negative | 4627540 - 4628175 | 23064.5 |
| dna primase | D4M06_RS22060 | Not Available | Positive | 4628319 - 4629032 | 28512.8 |
| eexn family lipoprotein | D4M06_RS22065 | Not Available | Negative | 4629165 - 4629419 | 9586.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




