Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus biogenesis protein pilp | D4M06_RS21970 | Not Available | Negative | 4611950 - 4612444 | 17634.2 |
| type 4b pilus protein pilo2 | D4M06_RS21975 | Not Available | Negative | 4612428 - 4613750 | 49822.3 |
| piln family type ivb pilus formation outer membrane protein | D4M06_RS21980 | Not Available | Negative | 4613789 - 4615432 | 58024.9 |
| type iv secretory system conjugative dna transfer family protein | D4M06_RS21985 | Not Available | Negative | 4615483 - 4617441 | 73351.0 |
| p-type dna transfer atpase virb11 | D4M06_RS21990 | Not Available | Negative | 4617457 - 4618512 | 39831.7 |
| trbi/virb10 family protein | D4M06_RS21995 | Not Available | Negative | 4618531 - 4619670 | 41219.2 |
| trbg/virb9 family p-type conjugative transfer protein | D4M06_RS22000 | Not Available | Negative | 4619660 - 4620361 | 26698.4 |
| type iv secretion system protein | D4M06_RS22005 | Not Available | Negative | 4620427 - 4621161 | 28218.9 |
| traf protein | D4M06_RS22010 | Not Available | Negative | 4621161 - 4621295 | 4768.87 |
| conjugal transfer protein | D4M06_RS22015 | Not Available | Negative | 4621327 - 4623684 | 88336.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




