Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yifb family mg chelatase-like aaa atpase | D4M06_RS21920 | Not Available | Positive | 4603452 - 4604972 | 55220.6 |
| macrodomain ori organization protein maop | D4M06_RS21925 | Not Available | Negative | 4604997 - 4605335 | 13134.2 |
| hth-type transcriptional regulator hdfr | D4M06_RS21930 | Not Available | Positive | 4605454 - 4606293 | 31778.0 |
| Trna-trp | Not Available | Not Available | Positive | 4606389 - 4606464 | Not Available |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | D4M06_RS21940 | Not Available | Negative | 4606471 - 4607484 | 35629.8 |
| prepilin peptidase | D4M06_RS21945 | Not Available | Negative | 4607497 - 4608132 | 23749.0 |
| lytic transglycosylase domain-containing protein | D4M06_RS21950 | Not Available | Negative | 4608136 - 4608618 | 18159.2 |
| hypothetical protein | D4M06_RS21955 | Not Available | Negative | 4608685 - 4609242 | 19792.5 |
| type ii secretion protein f | D4M06_RS21960 | Not Available | Negative | 4609287 - 4610396 | 41831.3 |
| flp pilus assembly complex atpase component | D4M06_RS21965 | Not Available | Negative | 4610387 - 4611925 | 57253.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




