Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nupc/nupg family nucleoside cnt transporter | D4M06_RS00250 | Not Available | Negative | 49509 - 50759 | 43464.4 |
| pseudouridine-5'-phosphate glycosidase | D4M06_RS00255 | Not Available | Negative | 50853 - 51791 | 32911.8 |
| pseudouridine kinase | D4M06_RS00260 | Not Available | Negative | 51779 - 52711 | 33330.6 |
| pts fructose transporter subunit iibc | D4M06_RS00265 | Not Available | Negative | 53135 - 54826 | 57464.5 |
| 1-phosphofructokinase | D4M06_RS00270 | Not Available | Negative | 54843 - 55781 | 33757.6 |
| fused pts fructose transporter subunit iia/hpr protein | D4M06_RS00275 | Not Available | Negative | 55781 - 56911 | 39650.2 |
| sugar efflux transporter setb | D4M06_RS00280 | Not Available | Positive | 57279 - 58460 | 42692.5 |
| ykgj family cysteine cluster protein | D4M06_RS00285 | Not Available | Negative | 58457 - 58711 | 8954.96 |
| elongation factor p-like protein yeip | D4M06_RS00290 | Not Available | Positive | 58866 - 59438 | 21547.9 |
| mannitol dehydrogenase family protein | D4M06_RS00295 | Not Available | Positive | 59661 - 61127 | 53945.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




