Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | D4M06_RS21820 | Not Available | Negative | 4582196 - 4583326 | 42250.0 |
| eca polysaccharide chain length modulation protein | D4M06_RS21825 | Not Available | Negative | 4583382 - 4584428 | 39491.3 |
| udp-n-acetylglucosamine--undecaprenyl-phosphate n-acetylglucosaminephosphotransferase | D4M06_RS21830 | Not Available | Negative | 4584440 - 4585543 | 40911.6 |
| transcription termination factor rho | D4M06_RS21835 | Not Available | Negative | 4585783 - 4587042 | 47007.1 |
| rho operon leader peptide rhol | D4M06_RS21840 | Not Available | Negative | 4587127 - 4587228 | 3750.4 |
| thioredoxin trxa | D4M06_RS21845 | Not Available | Negative | 4587369 - 4587698 | 11807.2 |
| atp-dependent rna helicase rhlb | D4M06_RS21850 | Not Available | Positive | 4587829 - 4589094 | 47068.6 |
| guanosine-5'-triphosphate,3'-diphosphate diphosphatase | D4M06_RS21855 | Not Available | Positive | 4589230 - 4590714 | 54874.4 |
| dna helicase rep | D4M06_RS21860 | Not Available | Negative | 4590761 - 4592782 | 77100.7 |
| hypothetical protein | D4M06_RS21865 | Not Available | Positive | 4592999 - 4593448 | 16957.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




