Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | D4M06_RS21770 | Not Available | Negative | 4571187 - 4572572 | 50402.1 |
| lipopolysaccharide n-acetylmannosaminouronosyltransferase | D4M06_RS21775 | Not Available | Negative | 4572763 - 4573503 | 27981.9 |
| o-antigen assembly polymerase | D4M06_RS21780 | Not Available | Negative | 4573506 - 4574858 | 51524.2 |
| tdp-n-acetylfucosamine:lipid ii n-acetylfucosaminyltransferase | D4M06_RS21785 | Not Available | Negative | 4574855 - 4575934 | 40587.7 |
| lipid iii flippase wzxe | D4M06_RS21790 | Not Available | Negative | 4575931 - 4577181 | 45001.4 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | D4M06_RS21795 | Not Available | Negative | 4577183 - 4578313 | 41878.4 |
| dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferase | D4M06_RS21800 | Not Available | Negative | 4578318 - 4578992 | 24255.7 |
| glucose-1-phosphate thymidylyltransferase rfba | D4M06_RS21805 | Not Available | Negative | 4578970 - 4579851 | 32778.4 |
| dtdp-glucose 4,6-dehydratase | D4M06_RS21810 | Not Available | Negative | 4579870 - 4580937 | 39755.0 |
| udp-n-acetyl-d-mannosamine dehydrogenase | D4M06_RS21815 | Not Available | Negative | 4580937 - 4582199 | 45841.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




