Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin binding protein pbp4b | D4M06_RS21465 | Not Available | Positive | 4519695 - 4520999 | 47552.8 |
| porphyrinogen peroxidase | D4M06_RS21470 | Not Available | Negative | 4521057 - 4521956 | 33098.2 |
| rpoe-regulated lipoprotein | D4M06_RS21475 | Not Available | Negative | 4522052 - 4522627 | 20815.6 |
| duf2919 domain-containing protein | D4M06_RS21480 | Not Available | Negative | 4522688 - 4523137 | 17120.3 |
| acetyltransferase ypea | D4M06_RS21485 | Not Available | Negative | 4523124 - 4523549 | 16326.6 |
| n-acetylmuramoyl-l-alanine amidase amia | D4M06_RS21490 | Not Available | Positive | 4523763 - 4524632 | 31397.9 |
| oxygen-dependent coproporphyrinogen oxidase | D4M06_RS21495 | Not Available | Positive | 4524636 - 4525535 | 34290.4 |
| hth-type transcriptional regulator eutr | D4M06_RS21500 | Not Available | Negative | 4525541 - 4526593 | 40088.9 |
| ethanolamine utilization microcompartment protein eutk | D4M06_RS21505 | Not Available | Negative | 4526639 - 4527139 | 17833.6 |
| ethanolamine utilization microcompartment protein eutl | D4M06_RS21510 | Not Available | Negative | 4527152 - 4527811 | 22803.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




