Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxine/pyridoxal/pyridoxamine kinase | D4M06_RS21410 | Not Available | Negative | 4509085 - 4509936 | 30861.2 |
| cysteine synthase b | D4M06_RS21420 | Not Available | Negative | 4510411 - 4511322 | 32604.1 |
| sulfate/thiosulfate abc transporter atp-binding protein cysa | D4M06_RS21425 | Not Available | Negative | 4511456 - 4512553 | 41057.4 |
| sulfate/thiosulfate abc transporter permease cysw | D4M06_RS21430 | Not Available | Negative | 4512543 - 4513418 | 32516.5 |
| sulfate/thiosulfate abc transporter permease cyst | D4M06_RS21435 | Not Available | Negative | 4513418 - 4514251 | 30310.5 |
| sulfate abc transporter substrate-binding protein | D4M06_RS21440 | Not Available | Negative | 4514251 - 4515267 | 37630.6 |
| sdr family oxidoreductase ucpa | D4M06_RS21445 | Not Available | Negative | 4515425 - 4516216 | 27833.6 |
| hth-type transcriptional regulator murr | D4M06_RS21450 | Not Available | Negative | 4516345 - 4517202 | 31328.8 |
| n-acetylmuramic acid 6-phosphate etherase | D4M06_RS21455 | Not Available | Positive | 4517366 - 4518262 | 31113.7 |
| pts n-acetylmuramic acid transporter subunit iibc | D4M06_RS21460 | Not Available | Positive | 4518266 - 4519690 | 49786.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




