Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | D4M06_RS21360 | Not Available | Negative | 4498617 - 4499543 | 33935.1 |
| bile acid:sodium symporter | D4M06_RS21365 | Not Available | Positive | 4499633 - 4500631 | 36377.8 |
| hypothetical protein | D4M06_RS21370 | Not Available | Negative | 4500628 - 4500846 | 8415.57 |
| nad-dependent dna ligase liga | D4M06_RS21375 | Not Available | Negative | 4500848 - 4502863 | 73667.3 |
| cell division protein zipa | D4M06_RS21380 | Not Available | Negative | 4502934 - 4503932 | 36949.0 |
| sulfate transporter cysz | D4M06_RS21385 | Not Available | Positive | 4504162 - 4504923 | 29306.6 |
| cysteine synthase a | D4M06_RS21390 | Not Available | Positive | 4505108 - 4506079 | 34503.8 |
| phosphocarrier protein hpr | D4M06_RS21395 | Not Available | Positive | 4506463 - 4506720 | 9119.89 |
| phosphoenolpyruvate-protein phosphotransferase ptsi | D4M06_RS21400 | Not Available | Positive | 4506765 - 4508492 | 63537.5 |
| pts glucose transporter subunit iia | D4M06_RS21405 | Not Available | Positive | 4508533 - 4509042 | 18252.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




