Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf883 domain-containing protein | D4M06_RS21255 | Not Available | Negative | 4480706 - 4481035 | 11847.9 |
| ygac family protein | D4M06_RS21260 | Not Available | Positive | 4481187 - 4481531 | 13066.5 |
| l-alanine exporter alae | D4M06_RS21265 | Not Available | Negative | 4481568 - 4482017 | 16950.0 |
| dna-binding protein stpa | D4M06_RS21270 | Not Available | Positive | 4482685 - 4483089 | 15348.4 |
| thiosulfate sulfurtransferase ygap | D4M06_RS21275 | Not Available | Negative | 4483142 - 4483660 | 18431.6 |
| helix-turn-helix transcriptional regulator | D4M06_RS21280 | Not Available | Negative | 4483670 - 4483969 | 10626.0 |
| yqae/pmp3 family membrane protein | D4M06_RS21285 | Not Available | Positive | 4484152 - 4484310 | 5865.57 |
| potassium binding protein kbp | D4M06_RS21290 | Not Available | Positive | 4484394 - 4484843 | 16036.9 |
| dna-binding transcriptional regulator csir | D4M06_RS21295 | Not Available | Negative | 4484844 - 4485506 | 24992.3 |
| gaba permease | D4M06_RS21300 | Not Available | Negative | 4485527 - 4486927 | 51069.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




