Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | D4M06_RS21205 | Not Available | Negative | 4469716 - 4470900 | 41656.9 |
| proline/glycine betaine abc transporter substrate-binding protein prox | D4M06_RS21210 | Not Available | Negative | 4471092 - 4472084 | 36024.4 |
| glycine betaine/l-proline abc transporter permease prow | D4M06_RS21215 | Not Available | Negative | 4472141 - 4473205 | 37592.0 |
| glycine betaine/l-proline abc transporter atp-binding protein prov | D4M06_RS21220 | Not Available | Negative | 4473198 - 4474400 | 44164.6 |
| class 1b ribonucleoside-diphosphate reductase subunit beta | D4M06_RS21225 | Not Available | Negative | 4474756 - 4475715 | 36493.2 |
| class 1b ribonucleoside-diphosphate reductase subunit alpha | D4M06_RS21230 | Not Available | Negative | 4475725 - 4477869 | 80382.5 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | D4M06_RS21235 | Not Available | Negative | 4477842 - 4478252 | 15341.3 |
| glutaredoxin-like protein nrdh | D4M06_RS21240 | Not Available | Negative | 4478249 - 4478494 | 9139.98 |
| carboxymuconolactone decarboxylase family protein | D4M06_RS21245 | Not Available | Negative | 4478703 - 4479134 | 16175.4 |
| plp-dependent aminotransferase family protein | D4M06_RS21250 | Not Available | Positive | 4479222 - 4480556 | 49747.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




