Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose-1-phosphate/6-phosphogluconate phosphatase | D4M06_RS21155 | Not Available | Positive | 4461706 - 4462272 | 20800.1 |
| deda family protein | D4M06_RS21160 | Not Available | Positive | 4462269 - 4462697 | 15546.6 |
| glutamate--cysteine ligase | D4M06_RS21165 | Not Available | Positive | 4462770 - 4464326 | 58258.5 |
| s-ribosylhomocysteine lyase | D4M06_RS21170 | Not Available | Positive | 4464476 - 4464991 | 19445.4 |
| multidrug efflux mfs transporter permease subunit emrb | D4M06_RS21175 | Not Available | Negative | 4465055 - 4466593 | 55627.7 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emra | D4M06_RS21180 | Not Available | Negative | 4466610 - 4467782 | 42739.5 |
| multidrug efflux transporter emrab transcriptional repressor emrr | D4M06_RS21185 | Not Available | Negative | 4467909 - 4468439 | 20564.7 |
| hypothetical protein | D4M06_RS21190 | Not Available | Positive | 4468410 - 4468511 | 3678.61 |
| l-valine transporter subunit ygah | D4M06_RS21195 | Not Available | Negative | 4468530 - 4468865 | 11996.2 |
| azlc family abc transporter permease | D4M06_RS21200 | Not Available | Negative | 4468855 - 4469592 | 26095.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




