Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase subunit beta | D4M06_RS20665 | Not Available | Positive | 4377768 - 4379312 | 58548.1 |
| nitrate reductase molybdenum cofactor assembly chaperone | D4M06_RS20670 | Not Available | Positive | 4379312 - 4380007 | 26213.1 |
| respiratory nitrate reductase subunit gamma | D4M06_RS20675 | Not Available | Positive | 4380004 - 4380684 | 26019.5 |
| phzf family isomerase | D4M06_RS20680 | Not Available | Positive | 4380763 - 4381656 | 32240.7 |
| flavin reductase family protein | D4M06_RS20690 | Not Available | Positive | 4382895 - 4383338 | 16216.3 |
| tautomerase ppta | D4M06_RS20695 | Not Available | Negative | 4383342 - 4383569 | 8488.22 |
| cupin domain-containing protein | D4M06_RS20790 | Not Available | Negative | 4400652 - 4401773 | 42597.2 |
| excisionase | D4M06_RS20940 | Not Available | Negative | 4422362 - 4422598 | 8873.95 |
| replication protein | D4M06_RS20945 | Not Available | Positive | 4422702 - 4422909 | 7830.82 |
| site-specific dna recombinase | D4M06_RS20950 | Not Available | Positive | 4422970 - 4423524 | 20512.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




