Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | D4M06_RS20565 | Not Available | Positive | 4353685 - 4354707 | 37393.4 |
| d,d-dipeptide abc transporter permease | D4M06_RS20570 | Not Available | Positive | 4354704 - 4355600 | 31942.9 |
| abc transporter atp-binding protein | D4M06_RS20575 | Not Available | Positive | 4355597 - 4356583 | 36102.0 |
| atp-binding cassette domain-containing protein | D4M06_RS20580 | Not Available | Positive | 4356576 - 4357502 | 34553.0 |
| peroxiredoxin osmc | D4M06_RS20585 | Not Available | Negative | 4357558 - 4357989 | 15119.0 |
| biofilm-dependent modulation protein | D4M06_RS20590 | Not Available | Positive | 4358334 - 4358549 | 7988.24 |
| stationary-phase-induced ribosome-associated protein | D4M06_RS20595 | Not Available | Positive | 4358651 - 4358788 | 5096.13 |
| nad-dependent malic enzyme | D4M06_RS20600 | Not Available | Positive | 4358945 - 4360642 | 63136.9 |
| alcohol dehydrogenase adhp | D4M06_RS20605 | Not Available | Positive | 4360776 - 4361786 | 35371.6 |
| higa family addiction module antidote protein | D4M06_RS20610 | Not Available | Positive | 4361932 - 4362216 | 10313.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




