Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1281 domain-containing protein | D4M06_RS20510 | Not Available | Negative | 4339119 - 4340021 | 34022.8 |
| parb/repb/spo0j family plasmid partition protein | D4M06_RS20515 | Not Available | Negative | 4340716 - 4341687 | 35374.3 |
| plasmid-partitioning protein sopa | D4M06_RS20520 | Not Available | Negative | 4341687 - 4342853 | 43662.6 |
| repb family plasmid replication initiator protein | D4M06_RS20525 | Not Available | Negative | 4343441 - 4343701 | 10173.3 |
| glutamate decarboxylase | D4M06_RS20530 | Not Available | Positive | 4343702 - 4343966 | 10071.1 |
| acid resistance gamma-aminobutyrate antiporter gadc | D4M06_RS20535 | Not Available | Positive | 4344122 - 4345657 | 55106.1 |
| family 10 glycosylhydrolase | D4M06_RS20540 | Not Available | Positive | 4345788 - 4347107 | 49576.9 |
| diguanylate cyclase dosc | D4M06_RS20545 | Not Available | Positive | 4347484 - 4348866 | 53180.7 |
| d-alanyl-d-alanine dipeptidase | D4M06_RS20555 | Not Available | Positive | 4351538 - 4352119 | 21228.2 |
| abc transporter substrate-binding protein | D4M06_RS20560 | Not Available | Positive | 4352133 - 4353683 | 57631.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




