Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS20455 | Not Available | Negative | 4333832 - 4334062 | 8582.57 |
| hypothetical protein | D4M06_RS20460 | Not Available | Negative | 4334550 - 4334939 | 13586.3 |
| hypothetical protein | D4M06_RS20465 | Not Available | Negative | 4335058 - 4335249 | 7236.73 |
| duf1380 domain-containing protein | D4M06_RS20470 | Not Available | Negative | 4335246 - 4335668 | 15695.6 |
| antirestriction protein | D4M06_RS20475 | Not Available | Negative | 4335715 - 4336017 | 11566.8 |
| duf1472 domain-containing protein | D4M06_RS20480 | Not Available | Negative | 4336113 - 4336685 | 21729.0 |
| duf1380 domain-containing protein | D4M06_RS20490 | Not Available | Negative | 4337380 - 4337934 | 20953.4 |
| hypothetical protein | D4M06_RS20495 | Not Available | Negative | 4337828 - 4338049 | 8629.31 |
| dna methylase | D4M06_RS20500 | Not Available | Negative | 4338050 - 4338733 | 25399.5 |
| hypothetical protein | D4M06_RS20505 | Not Available | Negative | 4338810 - 4339115 | 11399.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




