Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tola family protein | D4M06_RS20400 | Not Available | Negative | 4323897 - 4324328 | 16109.3 |
| type i toxin-antitoxin system hok family toxin | D4M06_RS20410 | Not Available | Negative | 4326551 - 4326709 | 6108.69 |
| plasmid sos inhibition protein a | D4M06_RS20415 | Not Available | Negative | 4326941 - 4327702 | 29283.8 |
| conjugation system sos inhibitor psib | D4M06_RS20420 | Not Available | Negative | 4327699 - 4328133 | 15840.8 |
| parb/repb/spo0j family partition protein | D4M06_RS20425 | Not Available | Negative | 4328188 - 4330146 | 71661.1 |
| duf905 domain-containing protein | D4M06_RS20430 | Not Available | Negative | 4330212 - 4330445 | 9088.78 |
| single-stranded dna-binding protein | D4M06_RS20435 | Not Available | Negative | 4330502 - 4330954 | 16740.8 |
| hypothetical protein | D4M06_RS20440 | Not Available | Positive | 4331256 - 4331723 | 16544.1 |
| class i sam-dependent methyltransferase | D4M06_RS20445 | Not Available | Negative | 4331809 - 4332372 | 21091.7 |
| duf3560 domain-containing protein | D4M06_RS20450 | Not Available | Negative | 4332419 - 4333780 | 51724.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




