Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| repa leader peptide tap | D4M06_RS20310 | Not Available | Negative | 4305528 - 4305602 | 2715.43 |
| replication regulatory protein repa | D4M06_RS20315 | Not Available | Negative | 4305838 - 4306092 | 9406.44 |
| hypothetical protein | D4M06_RS20320 | Not Available | Negative | 4306332 - 4306670 | 12673.7 |
| hemolysin expression modulator hha | D4M06_RS20325 | Not Available | Negative | 4306708 - 4306917 | 8311.92 |
| endonuclease | D4M06_RS20330 | Not Available | Negative | 4306963 - 4307424 | 17872.7 |
| anr family transcriptional regulator | D4M06_RS20335 | Not Available | Negative | 4307669 - 4307881 | 8200.7 |
| fertility inhibition protein fino | D4M06_RS20340 | Not Available | Negative | 4308014 - 4308574 | 21147.7 |
| alpha/beta hydrolase | D4M06_RS20345 | Not Available | Negative | 4308677 - 4309537 | 31733.9 |
| type-f conjugative transfer system pilin acetylase trax | D4M06_RS20350 | Not Available | Negative | 4309596 - 4310342 | 27219.4 |
| toxin b | D4M06_RS20375 | Not Available | Negative | 4312601 - 4322110 | 361997.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




