Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS20195 | Not Available | Positive | 4282137 - 4282553 | 15994.5 |
| lactate utilization protein c | D4M06_RS20200 | Not Available | Negative | 4283048 - 4283743 | 25165.1 |
| iron-sulfur cluster-binding protein | D4M06_RS20205 | Not Available | Negative | 4283736 - 4285163 | 53003.0 |
| (fe-s)-binding protein | D4M06_RS20210 | Not Available | Negative | 4285174 - 4285893 | 26063.8 |
| arac family transcriptional regulator | D4M06_RS20215 | Not Available | Negative | 4286420 - 4287274 | 31492.2 |
| pyridine nucleotide-disulfide oxidoreductase | D4M06_RS20220 | Not Available | Positive | 4287500 - 4288825 | 48242.1 |
| duf1471 domain-containing protein | D4M06_RS20225 | Not Available | Positive | 4288934 - 4289170 | 8442.19 |
| reactive chlorine species resistance protein rclc | D4M06_RS20230 | Not Available | Positive | 4289182 - 4289775 | 21757.5 |
| aldo/keto reductase | D4M06_RS20235 | Not Available | Negative | 4289935 - 4290804 | 32705.2 |
| helix-turn-helix domain-containing protein | D4M06_RS20240 | Not Available | Positive | 4291053 - 4291910 | 33893.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




