Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor allr | D4M06_RS20070 | Not Available | Negative | 4253048 - 4253863 | 29271.4 |
| ureidoglycolate lyase | D4M06_RS20075 | Not Available | Negative | 4253941 - 4254423 | 18223.6 |
| hth-type transcriptional activator alls | D4M06_RS20080 | Not Available | Positive | 4254653 - 4255579 | 34539.7 |
| trna 2-selenouridine(34) synthase mnmh | D4M06_RS20085 | Not Available | Positive | 4255648 - 4256742 | 41076.1 |
| hypothetical protein | D4M06_RS20095 | Not Available | Negative | 4257973 - 4258233 | 10018.4 |
| rhs repeat protein | D4M06_RS20100 | Not Available | Negative | 4258214 - 4258962 | 28388.2 |
| duf1116 domain-containing protein | D4M06_RS20105 | Not Available | Negative | 4258976 - 4260394 | 50364.9 |
| acyl-coa synthetase fdra | D4M06_RS20110 | Not Available | Negative | 4260394 - 4261941 | 55593.2 |
| duf2877 domain-containing protein | D4M06_RS20115 | Not Available | Negative | 4261931 - 4262794 | 32246.6 |
| ankyrin repeat domain-containing protein | D4M06_RS20120 | Not Available | Negative | 4262834 - 4263439 | 21630.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




