Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated protein ybcj | D4M06_RS19965 | Not Available | Positive | 4230142 - 4230354 | 7389.95 |
| metal-dependent hydrolase | D4M06_RS19970 | Not Available | Positive | 4230462 - 4230983 | 19457.4 |
| cysteine--trna ligase | D4M06_RS19975 | Not Available | Negative | 4231019 - 4232404 | 52215.0 |
| peptidylprolyl isomerase b | D4M06_RS19980 | Not Available | Positive | 4232578 - 4233072 | 18168.5 |
| udp-2,3-diacylglucosamine diphosphatase | D4M06_RS19985 | Not Available | Positive | 4233075 - 4233797 | 26953.8 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | D4M06_RS19990 | Not Available | Positive | 4233915 - 4234424 | 17781.3 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | D4M06_RS19995 | Not Available | Positive | 4234421 - 4235488 | 39574.6 |
| carbamate kinase | D4M06_RS20000 | Not Available | Negative | 4235627 - 4236520 | 31733.2 |
| duf2877 domain-containing protein | D4M06_RS20005 | Not Available | Negative | 4236517 - 4237332 | 29598.8 |
| duf1116 domain-containing protein | D4M06_RS20010 | Not Available | Negative | 4237343 - 4238602 | 45011.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




