Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gentisate 1,2-dioxygenase | D4M06_RS00120 | Not Available | Negative | 20550 - 21578 | 38481.4 |
| aromatic acid/h+ symport family mfs transporter | D4M06_RS00125 | Not Available | Negative | 21590 - 22948 | 48462.8 |
| lysr family transcriptional regulator | D4M06_RS00130 | Not Available | Positive | 23075 - 23983 | 33802.3 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 23363 - 23739 | Not Available |
| cida/lrga family protein | D4M06_RS00135 | Not Available | Positive | 24114 - 24512 | 14593.6 |
| cidb/lrgb family autolysis modulator | D4M06_RS00140 | Not Available | Positive | 24509 - 25204 | 24437.0 |
| cytidine deaminase | D4M06_RS00145 | Not Available | Positive | 25334 - 26218 | 31542.6 |
| outer membrane permeability protein sana | D4M06_RS00150 | Not Available | Positive | 26368 - 27087 | 27288.5 |
| Ncrna_class:other | Not Available | Not Available | Positive | 26448 - 26578 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 26744 - 26875 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




