Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1283 family protein | D4M06_RS19370 | Not Available | Positive | 4115062 - 4115403 | 12902.2 |
| spermidine n1-acetyltransferase | D4M06_RS19375 | Not Available | Positive | 4115438 - 4115998 | 21888.2 |
| ynfc family lipoprotein | D4M06_RS19380 | Not Available | Negative | 4116001 - 4116711 | 26416.2 |
| duf1161 domain-containing protein | D4M06_RS19385 | Not Available | Positive | 4116819 - 4117124 | 10551.3 |
| dimethyl sulfoxide reductase subunit a | D4M06_RS19390 | Not Available | Positive | 4117323 - 4119749 | 89532.5 |
| dimethyl sulfoxide reductase subunit a | D4M06_RS19395 | Not Available | Positive | 4119810 - 4122233 | 89954.9 |
| dimethylsulfoxide reductase subunit b | D4M06_RS19400 | Not Available | Positive | 4122244 - 4122861 | 22752.9 |
| dimethyl sulfoxide reductase anchor subunit | D4M06_RS19405 | Not Available | Positive | 4122863 - 4123717 | 30461.5 |
| tat proofreading chaperone dmsd | D4M06_RS19410 | Not Available | Positive | 4123760 - 4124374 | 23345.8 |
| voltage-gated clc-type chloride channel clcb | D4M06_RS19415 | Not Available | Positive | 4124532 - 4125824 | 45650.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




