Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna recombination protein rmuc | D4M06_RS19265 | Not Available | Positive | 4095747 - 4097174 | 54767.6 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | D4M06_RS19270 | Not Available | Positive | 4097269 - 4098024 | 28074.8 |
| ubiquinone biosynthesis protein ubij | D4M06_RS19275 | Not Available | Positive | 4098038 - 4098643 | 22077.8 |
| ubiquinone biosynthesis regulatory protein kinase ubib | D4M06_RS19280 | Not Available | Positive | 4098640 - 4100280 | 63206.4 |
| sec-independent protein translocase subunit tata | D4M06_RS19285 | Not Available | Positive | 4100359 - 4100628 | 9664.5 |
| sec-independent protein translocase subunit tatb | D4M06_RS19290 | Not Available | Positive | 4100632 - 4101147 | 18421.8 |
| sec-independent protein translocase subunit tatc | D4M06_RS19295 | Not Available | Positive | 4101150 - 4101926 | 28877.9 |
| 3'-5' ssdna/rna exonuclease tatd | D4M06_RS19300 | Not Available | Positive | 4101968 - 4102750 | 29028.6 |
| transcription/translation regulatory transformer protein rfah | D4M06_RS19305 | Not Available | Negative | 4102747 - 4103235 | 18341.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | D4M06_RS19310 | Not Available | Positive | 4103402 - 4104895 | 55650.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




