Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recq | D4M06_RS19215 | Not Available | Positive | 4084279 - 4086108 | 68367.6 |
| threonine export protein rhtc | D4M06_RS19220 | Not Available | Positive | 4086172 - 4086792 | 22475.5 |
| homoserine/homoserine lactone efflux protein | D4M06_RS19225 | Not Available | Negative | 4086854 - 4087474 | 22428.2 |
| lysophospholipase l2 | D4M06_RS19230 | Not Available | Positive | 4087585 - 4088607 | 38962.4 |
| sugar/pyridoxal phosphate phosphatase yigl | D4M06_RS19235 | Not Available | Positive | 4088615 - 4089415 | 29705.5 |
| biotin transporter | D4M06_RS19240 | Not Available | Positive | 4089491 - 4090390 | 33729.0 |
| hth-type transcriptional regulator metr | D4M06_RS19245 | Not Available | Negative | 4090278 - 4091231 | 35631.0 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | D4M06_RS19250 | Not Available | Positive | 4091467 - 4093728 | 84780.3 |
| dienelactone hydrolase family protein | D4M06_RS19255 | Not Available | Negative | 4093768 - 4094583 | 29397.8 |
| uridine phosphorylase | D4M06_RS19260 | Not Available | Positive | 4094845 - 4095606 | 27151.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




