Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1249 family protein | D4M06_RS19065 | Not Available | Negative | 4053448 - 4053870 | 16549.0 |
| adp-ribose diphosphatase | D4M06_RS19070 | Not Available | Negative | 4053871 - 4054500 | 23668.2 |
| outer membrane channel protein tolc | D4M06_RS19075 | Not Available | Positive | 4054705 - 4056186 | 53729.7 |
| duf1190 family protein | D4M06_RS19080 | Not Available | Positive | 4056334 - 4057005 | 23480.7 |
| glutathionylspermidine synthase family protein | D4M06_RS19085 | Not Available | Positive | 4057011 - 4058171 | 45028.4 |
| 4,5-dopa dioxygenase extradiol | D4M06_RS19090 | Not Available | Negative | 4058209 - 4058498 | 10613.5 |
| anaerobic sulfatase maturase | D4M06_RS19095 | Not Available | Positive | 4058658 - 4059893 | 46543.7 |
| arylsulfatase | D4M06_RS19100 | Not Available | Negative | 4060061 - 4061716 | 60657.9 |
| protoheme ix biogenesis protein hemy | D4M06_RS19105 | Not Available | Negative | 4062395 - 4063591 | 45247.7 |
| uroporphyrinogen-iii c-methyltransferase | D4M06_RS19110 | Not Available | Negative | 4063594 - 4064829 | 44492.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




