Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase maturation nickel metallochaperone hypa | D4M06_RS18860 | Not Available | Negative | 4010826 - 4011167 | 12684.1 |
| hydrogenase-2 assembly chaperone | D4M06_RS18865 | Not Available | Negative | 4011160 - 4011648 | 17920.6 |
| hyad/hybd family hydrogenase maturation endopeptidase | D4M06_RS18870 | Not Available | Negative | 4011641 - 4012135 | 17724.8 |
| hydrogenase 2 large subunit | D4M06_RS18875 | Not Available | Negative | 4012135 - 4013838 | 62494.6 |
| ni/fe-hydrogenase cytochrome b subunit | D4M06_RS18880 | Not Available | Negative | 4013835 - 4015013 | 43604.6 |
| hydrogenase 2 operon protein hyba | D4M06_RS18885 | Not Available | Negative | 4015003 - 4015989 | 36005.0 |
| hydrogenase 2 small subunit | D4M06_RS18890 | Not Available | Negative | 4015992 - 4017110 | 39654.3 |
| duf2623 domain-containing protein | D4M06_RS18895 | Not Available | Negative | 4017299 - 4017586 | 10946.1 |
| dienelactone hydrolase family protein | D4M06_RS18900 | Not Available | Negative | 4017705 - 4018592 | 32659.7 |
| l-glyceraldehyde 3-phosphate reductase | D4M06_RS18905 | Not Available | Positive | 4018749 - 4019789 | 38817.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




