Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-dipeptidase dcp | D4M06_RS18785 | Not Available | Negative | 3996309 - 3998354 | 77454.7 |
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | D4M06_RS18790 | Not Available | Positive | 3998491 - 3999237 | 27264.6 |
| gntr family transcriptional regulator | D4M06_RS18795 | Not Available | Positive | 3999326 - 4000012 | 26566.7 |
| putative selenium delivery protein ydfz | D4M06_RS18800 | Not Available | Positive | 4000189 - 4000392 | 7276.83 |
| mannitol dehydrogenase family protein | D4M06_RS18805 | Not Available | Negative | 4000428 - 4001888 | 53584.2 |
| mhs family mfs transporter | D4M06_RS18810 | Not Available | Negative | 4001977 - 4003250 | 45714.2 |
| is66 family insertion sequence element accessory protein tnpb | D4M06_RS18820 | Not Available | Positive | 4003432 - 4003782 | 13118.1 |
| bifunctional glutathionylspermidine amidase/synthase | D4M06_RS18845 | Not Available | Negative | 4007512 - 4009371 | 70536.7 |
| glutathione-dependent disulfide-bond oxidoreductase | D4M06_RS18850 | Not Available | Positive | 4009576 - 4010442 | 32393.4 |
| hydrogenase maturation factor hybg | D4M06_RS18855 | Not Available | Negative | 4010565 - 4010813 | 8808.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




