Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | D4M06_RS18685 | Not Available | Negative | 3979898 - 3981316 | 52169.5 |
| duf4186 domain-containing protein | D4M06_RS18690 | Not Available | Negative | 3981455 - 3981814 | 13553.5 |
| glutaminase b | D4M06_RS18695 | Not Available | Negative | 3981814 - 3982740 | 33517.6 |
| succinate-semialdehyde dehydrogenase | D4M06_RS18700 | Not Available | Negative | 3982804 - 3984192 | 49806.8 |
| lysr family transcriptional regulator | D4M06_RS18705 | Not Available | Positive | 3984293 - 3985174 | 32404.8 |
| putative protein ynek | D4M06_RS18710 | Not Available | Positive | 3985252 - 3986040 | 30242.3 |
| putative protein ynek | D4M06_RS18715 | Not Available | Positive | 3986047 - 3986367 | 12290.9 |
| l-arabinose mfs transporter | D4M06_RS18720 | Not Available | Positive | 3986518 - 3987708 | 42570.9 |
| naat family transporter marc | D4M06_RS18725 | Not Available | Negative | 3987733 - 3988398 | 23539.7 |
| multiple antibiotic resistance transcriptional regulator marr | D4M06_RS18730 | Not Available | Positive | 3988610 - 3989044 | 16084.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




