Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator lsrr | D4M06_RS18635 | Not Available | Negative | 3969289 - 3970242 | 33828.0 |
| autoinducer 2 abc transporter atp-binding protein lsra | D4M06_RS18640 | Not Available | Positive | 3970491 - 3972026 | 55689.6 |
| autoinducer 2 abc transporter permease lsrc | D4M06_RS18645 | Not Available | Positive | 3972020 - 3973048 | 36368.1 |
| autoinducer 2 abc transporter permease lsrd | D4M06_RS18650 | Not Available | Positive | 3973048 - 3974040 | 34458.6 |
| autoinducer 2 abc transporter substrate-binding protein lsrb | D4M06_RS18655 | Not Available | Positive | 3974052 - 3975074 | 36686.9 |
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | D4M06_RS18660 | Not Available | Positive | 3975101 - 3975976 | 31896.6 |
| (4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | D4M06_RS18665 | Not Available | Positive | 3976000 - 3976290 | 11255.4 |
| trans-aconitate 2-methyltransferase | D4M06_RS18670 | Not Available | Positive | 3976347 - 3977105 | 28948.3 |
| hypothetical protein | D4M06_RS18675 | Not Available | Negative | 3977109 - 3978023 | 34825.0 |
| tagaturonate reductase | D4M06_RS18680 | Not Available | Negative | 3978220 - 3979671 | 54811.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




